WrightTools.data.Data.create_dataset

Data.create_dataset(name, shape=None, dtype=None, data=None, **kwds)

Create a new HDF5 dataset

name

Name of the dataset (absolute or relative). Provide None to make an anonymous dataset.

shape

Dataset shape. Use “()” for scalar datasets. Required if “data” isn’t provided.

dtype

Numpy dtype or string. If omitted, dtype(‘f’) will be used. Required if “data” isn’t provided; otherwise, overrides data array’s dtype.

data

Provide data to initialize the dataset. If used, you can omit shape and dtype arguments.

Keyword-only arguments:

chunks

(Tuple or int) Chunk shape, or True to enable auto-chunking. Integers can be used for 1D shape.

maxshape

(Tuple or int) Make the dataset resizable up to this shape. Use None for axes you want to be unlimited. Integers can be used for 1D shape.

compression

(String or int) Compression strategy. Legal values are ‘gzip’, ‘szip’, ‘lzf’. If an integer in range(10), this indicates gzip compression level. Otherwise, an integer indicates the number of a dynamically loaded compression filter.

compression_opts

Compression settings. This is an integer for gzip, 2-tuple for szip, etc. If specifying a dynamically loaded compression filter number, this must be a tuple of values.

scaleoffset

(Integer) Enable scale/offset filter for (usually) lossy compression of integer or floating-point data. For integer data, the value of scaleoffset is the number of bits to retain (pass 0 to let HDF5 determine the minimum number of bits necessary for lossless compression). For floating point data, scaleoffset is the number of digits after the decimal place to retain; stored values thus have absolute error less than 0.5*10**(-scaleoffset).

shuffle

(T/F) Enable shuffle filter.

fletcher32

(T/F) Enable fletcher32 error detection. Not permitted in conjunction with the scale/offset filter.

fillvalue

(Scalar) Use this value for uninitialized parts of the dataset.

track_times

(T/F) Enable dataset creation timestamps.

track_order

(T/F) Track attribute creation order if True. If omitted use global default h5.get_config().track_order.

external

(Iterable of tuples) Sets the external storage property, thus designating that the dataset will be stored in one or more non-HDF5 files external to the HDF5 file. Adds each tuple of (name, offset, size) to the dataset’s list of external files. Each name must be a str, bytes, or os.PathLike; each offset and size, an integer. If only a name is given instead of an iterable of tuples, it is equivalent to [(name, 0, h5py.h5f.UNLIMITED)].

allow_unknown_filter

(T/F) Do not check that the requested filter is available for use. This should only be used with write_direct_chunk, where the caller compresses the data before handing it to h5py.